I think this might the best layout of the ones presented, too. I imagine they are buttons that one would press quite often, so at the right they are easy to access and not in the way. In fact it might better than having them horizontally, because then you're hand would be constantly blocking the keyboard when pressing them.
Oh and obviously the octaves will follow the buttons, with the highest octave keyboard at the top and the lowest at the bottom.
I can see that my unfamiliarity with Midibox is showing. Still, I wonder if there are pages where the keyboard and its LEDs could provide some additional functions (arpeggiator, custom delays (e.g. if your delay repeats 8 times you'll see 8 green LEDs on the keyboard, pressing a key turns the LED red and mutes that repeat, so you could have 6 repeats - mute - one repeat) or easy access to presets on certain pages)?